SE1950218

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4261
  • Lotus japonicus
  • SE1950218
  • PIF/harbinger
  • To19
  • CM0019:7490-7623
  • TAA
  • GCATGTTTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATA           TCAGTTT        ----------------  AT        C     CCC       ACTC
     GCATGTTTGGA       ATTTTTCC                TC  AGTCAATT TGGGA   AGAAGCT    
     |||||||||||       ||||||||                ||  |||||||| |||||   |||||||    A
     CGTACAAACCT       TAGGAAGG                AG  TTAGTTAA ACTCT   TCTTCGA    
AATCA           ------T        TGTTAACTAAGATTTC  GT        A     ---       ACAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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