SE1910226

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4269
  • Lotus japonicus
  • SE1910226
  • Tc1/Mariner
  • St5
  • CM0044:274786-274935
  • TA
  • TACACCCTCCGGTCACATATATAAGAAAAAAACACTTTTTAGGTTCATTCATTTAATGAATGTATCTAGTTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
                         A      C            C                           TT
TACACCCTCCGGTCACATATATAAG AAAAAA ACTTTTTAGGTT ATTCATTTAATGAATGTATCTAGTTGT  
||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||   
ATGTGGGAGGCCAGTGTATATATTC TTTTTT TGAAAAATCCAA TAAGTAAATTACTTACATAGATCAGTA  
                         G      A            A                           AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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