SE1920227

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4270
  • Lotus japonicus
  • SE1920227
  • Mutator
  • M3
  • CM0414:345170-345381
  • TAAAATTAT
  • GAATTTAATGGGAATACACTGTCAGTGTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAATTAT  A         A  A               CTTTG       A T  C       AATTCC    C  C  -C     -       -       TTA
         GA TTTAATGGG AT CACTGTCAGTGTAAA     TTTACAC G CG CCAATTG      GCCA AT AG  AAATA TATTTTT GTTTTAA   
         || ||||||||| || |||||||||||||||     ||||||| | || |||||||      |||| || ||  ||||| ||||||| |||||||   A
         CT AAATTACCT TA GTGACAGTCACATTT     AAATGTG C GT GGTTAGT      CGGT TA TC  TTTAT ATAGAAA TAGAATT   
TATTAAAAT  C         A  C               TGTCA       A T  T       GTTGTA    A  T  AC     T       G       TAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3