SE1910231

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4274
  • Lotus japonicus
  • SE1910231
  • Tc1/Mariner
  • St3
  • LjSGA_145207:469-618
  • TA
  • TACACCCTCCGGTCACTATTATAAGCAAAAGTTAGTTTTGTAGGTTCATTCAATAAATGATGTATGTGACCAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                                 A     G                            AC   TT
TACACCCTCCGGTCACTATTATAAGCAAAAGTT GTTTT TAGGTTCATTCAATAAATGATGTATGTG  CAT  
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  |||   
ATGTGGGAGGCCAGTGATAATATTCGTTTTCAA CGAAA ATCCAAGTAAGTTATTTACTACATACAT  GTA  
                                 C     A                            CA   AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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