SE1920283

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4326
  • Lotus japonicus
  • SE1920283
  • Mutator
  • M51
  • LjSGA_121913:118-315
  • ATAAAATAA
  • GGGAGAAACTTAGATGAAGTTCCTTAAATCTATTTCATCAAGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATAAAATAA   A           G          AA       C         ACCA     GTGATGATACATGTGTAACTATTTCTAAAAATAAATA
         GGG GAAACTTAGAT AAGTTCCTTA  TCTATTT ATCAAGTTT    ATCAT                                     
         ||| ||||||||||| ||||||||||  ||||||| |||||||||    |||||                                     T
         CCT TTTTGAATCTA TTCAAGGAAT  AGGTAAA TAGTTCAAA    ACACA                                     
AATAAAATA   A           G          GG       A         ---C     TTAAAAAGTTTAAAACTGTTATTTAAGAATTATTTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3