SE1920291

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4334
  • Lotus japonicus
  • SE1920291
  • Mutator
  • M52
  • LjT29E04:68483-68740
  • CTTAAAAGT
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTAAAAGTATATTTATATTCCA  A    TTAATCTCACATAACATGATCATGTGAAGATCTCAGCCTTTAATTTTATTTTAATGAAATTTGGACCCTTAATGGATATATATATAGAGAGAGAGAGAAAATTAAAA
                       TC TGTG                                                                                                           
                       || ||||                                                                                                           T
                       TC CCTA                                                                                                           
                TGAAAAT  -    AACCTAGGGGAGCATACAATTAAAGTGTACTAGTACAGTACACTTTCTAGATTTGGTAATTAATGAAAAAAATTACTTTAGACTACCAATAATAATAAAAGACGTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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