SE1950296

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4339
  • Lotus japonicus
  • SE1950296
  • PIF/harbinger
  • To24
  • CM1439:293863-294073
  • TAA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
TA  A  C    --      - C  - TGGGTGAATGTGAAAGCACATTCATTCAACCCAACAAGTACATTCCGTTGGCTGAATGTGCATTGAAAATCGTGATCTCGAAT
  AG GC TGTT  TGGTTT T AG T                                                                                   
  || || ||||  |||||| | || |                                                                                    
  GG AT GTAT  AGTAGT G AG G                                                                                   
    -  -    AG      A -  T TGAGTTCCTCAACTATTACGTATATTCTTTCGTTAAATCACGCACAAACCAAAAATCAATCCTTCAGGCAAACTTCGTAACCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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