SE1910316

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4359
  • Lotus japonicus
  • SE1910316
  • Tc1/Mariner
  • St3
  • CM1102:68716-68865
  • TA
  • TACACCCTCCGGTCACTATTATAAGCAAAAAACAAGTTTTTATATTCTTCAATAAATGATGTATCTAGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
             C                     GT     T    -  C                    TATA
TACACCCTCCGGT ACTATTATAAGCAAAAAACAA  TTTTA ATTC TT AATAAATGATGTATCTAGTC    
||||||||||||| |||||||||||||||||||||  ||||| |||| || ||||||||||||||||||||    A
ATGTGGGAGGCCA TGATAATATTCGTTTTTTGTT  AAAAT TAAG AA TTATTTACTACATAGATCAG    
             A                     GT     C    T  C                    TAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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