SE1950351

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4394
  • Lotus japonicus
  • SE1950351
  • PIF/harbinger
  • To28
  • CM0191:284978-285102
  • TAA
  • ATAACATGTTCGGTTCTACAATGATATGCACTAGAATCACTTATGATTAGAAGCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   A      C   TC      G TAT    T      A TT T  -------          CGA
  ATA CATGTT GGT  TACAAT A   GCAC AGAATC C  A GA       TTAGAAGCTA   
  ||| |||||| |||  |||||| |   |||| |||||| |  | ||       ||||||||||   G
  TAT GTGCAG CTA  GTGTTA T   TGTG TCTTAG G  T CT       AGTCTTCGAT   
AA   C      A   TA      G ---    -      - TT C  ACAAATG          TCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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