SE1920394

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4437
  • Lotus japonicus
  • SE1920394
  • Mutator
  • M11
  • CM0005:479863-480059
  • GTTGGAAAA
  • GGATTTGGATCCTCTCCAGCT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTTGGAAAA     T               ------      GGGTCCAGCAATGTATATCACACTTAAAAAAATTTAGTGTTTAAATTACTTTTTTCACC
         GGATT GGATCCTCTCCAGCT      GCTGGA                                                           
         ||||| |||||||||||||||      ||||||                                                           T
         CCTAA CCTAGGAGAGGTCGG      GGAGAG                                                           
AAAAGGTTG     C               ATTTTA      GTCGGAGATGCCGAGTAAATATCGGTATCTAGTTTTATTAATTACCAACTCTACACAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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