SE1920409

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4452
  • Lotus japonicus
  • SE1920409
  • Mutator
  • M60
  • CM0508:315715-315919
  • TTAAATTAA
  • TTAAATTAATGAGTAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
     A    T       AATATATACACACTTCATTTTTTAAACACTTCATTTTCACCTCTTTTTATTTCTATCTCTCTCATCTTATCATC   CACATCTCATATTTTCTCTCTCTTACTTTTTCTTTTCTTCCTA
 TTAA TTAA GAGTAAT                                                                          TAT                                           
 |||| |||| |||||||                                                                          |||                                           T
 AATT AATT CTCATTA                                                                          GGA                                           
T    A    -       ----------------------------------------------------------------------CAAA   GGTGTGGAGAAAAAACTACACCTCTCCACCTTACCACTCTCTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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