SE1920418

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4461
  • Lotus japonicus
  • SE1920418
  • Mutator
  • M67
  • CM0996:709817-710088
  • TATTATAAA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTATAAAG   AATGCTATATAGTACGAGAGTGCACGTACGAAGAATGCACGAGAGTAATTTTGTGGCGGTTTTAAACCGCCACAAAATTACAACTGCCAAAAAAAAAAGCAAACCTACTATTTCTGGCGGTTCAAAA
          AGC                                                                                                                               
          |||                                                                                                                                
          ATA                                                                                                                               
        AA   TTATCCTTTTACGACACCCCGTGCTGGAACCCCGAGCACGTGGTGCGTGCTTCGTAAAAGACCGCCAATCTTTGGCGGTCTTTGGCATCGAAAAGAAAAATAAAACTGTCAAGATTAAAACACCGCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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