SE1920437

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4480
  • Lotus japonicus
  • SE1920437
  • Mutator
  • M60
  • LjB14I18:49186-49391
  • GTATAGTGA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
GTAT     ACAAC ATGATATATACACACCTCATTTTCTAAACACTTCATTTCCACTCATTTTTATTTCTATCTCTCTCATCTTATTATCTATCACATCTTATAC
    AGTGA     A                                                                                           
    |||||     |                                                                                           T
    GTGAT     A                                                                                           
  AA     ----- TGCTTATTACAATACAACTGTGGAGATTTTACTCCACCTCTCTCCACCTCCTCCTCTCTCTATCCTTCTTTTCTTTTTCATTCTCTCTCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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