SE1930444

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4487
  • Lotus japonicus
  • SE1930444
  • hAT
  • Hat6
  • CM0123:152895-153063
  • ATCTAGAA
  • TCTAGAACAGTGTTATCAA

Secondary structure and sequence

TSD    TIR
5'



3' 
A      A                   T GCGGACCATTGCGGTGAGCCAAAAATCCGCTATTTCGGTCGCTATTTGGCGGCGAA
 TCTAGA CAGTGTTATCAAATCGCGA C                                                        
 |||||| ||||||||||||||||||| |                                                         
 AGATCT GTCACAATAGTTTATCGCC G                                                        
A      A                   - ATACGGCGATATCGCATCGCCTAAAAACCGATTAGCGCTGCGGCGATAAAGGCGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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