SE1920456

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4499
  • Lotus japonicus
  • SE1920456
  • Mutator
  • M60
  • CM0297:425726-425928
  • TTTTAACAA
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTAACAACAATAATTA     -  A   -    AAATGAGGTGGAATAAGGTGGAGGAAGAGAGAGATAGGAAGAAAAGAAAAAGTAAGAGTGAGAAAGTATAAGA
                  TTTAT TC CAC CTCA                                                                         
                  ||||| || ||| ||||                                                                         T
                  TTCCC TT ACT TATA                                                                         
           AACAATT     A  -   A    TGTGTGGAGAAAAAAATATGTGAAGTAAAGGTGGATAAAAATAAAGATAGAGAGAGGAGAATAGTAGATAGTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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