SE1920460

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4503
  • Lotus japonicus
  • SE1920460
  • Mutator
  • M15
  • CM0545:262957-263160
  • TTCCGTCTC
  • GGGGTTGTCTAAATGACCCATGATAAAGTTTGGGTTAAATAACCCATCATCCAATCACATTGGAGATAAATGAGTTGGAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCCGTCTC                                                                            -     TTCTATTTTTT
         GGGGTTGTCTAAATGACCCATGATAAAGTTTGGGTTAAATAACCCATCATCCAATCACATTGGAGATAAATGAGTT GGAAT           
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||           A
         CCCCAACAGATTTACTGGGTACTATTTCAAACCCAATTTATTGGGTAGTAGGTTAGTGTAACCTCTATTTACTCAA CTTTA           
CTCTGTCTT                                                                            A     TTTAATTATTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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