SE1920463

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4506
  • Lotus japonicus
  • SE1920463
  • Mutator
  • M60
  • CM0046:1130378-1130581
  • ATCTAGAAA
  • TCTAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
 A      AACAAC    A   ATA        ATGTTTTAAACACTTCATTTCCACCTCTTTTTATTTCTATCTCTCTCCTCTTAACATCTATCACATCTCA
  TCTAGA      AATG TAT   CACACCTC                                                                      
  ||||||      |||| |||   ||||||||                                                                       
  AGATCT      TTAC ATA   GTGTGGAG                                                                      
AA      -ACTTA    A   CAA        ATTTTACTCCACCTCTCTCCACCTCCTACTCTCTCTATCCTTCTTTTCTTTTTCATTCTCTCTATTTTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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