SE1920471

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4514
  • Lotus japonicus
  • SE1920471
  • Mutator
  • M60
  • CM0133:781651-781855
  • GAATGTTAA
  • AATGTTAATCAATAATGTTACTTACACACTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
  G      AA         T  CT              --  AG  GGAAAAGGTGGAATGATGAGAGAGATAGGAAGAAAAGAAAAAGTAAAAGAGAAAAAGTA
   AATGTT  TCAATAATG TA  TACACACTTCTTTT  TA  GT                                                           
   ||||||  ||||||||| ||  ||||||||||||||  ||  ||                                                           T
   TTGTAG  GGTTGTTAC AT  ATGTGTGGAGTACA  AT  TT                                                           
TAA      --         T  AT              AA  --  GTGAAGTAAAGGTGGATAAAAACAAAAATAGAGAAAGGAGAATAGTAGATAGTGTAGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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