SE1950472

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4515
  • Lotus japonicus
  • SE1950472
  • PIF/harbinger
  • To24
  • CM0042:120994-121147
  • TTA
  • GCCTGTTTGGTTTTCAGTTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAGA  C                  -----   ------      AAAGCACATTCACTCAACCCAATAAGTGCATTCCGT
     GC TGTTTGGTTTTCAGTTGG     GTG      AATGTG                                    
     || ||||||||||||||||||     |||      ||||||                                    T
     CG ACAAACCAAAAGTCAATC     GAC      CGTAAC                                    
ATTCA  T                  CTTCA   AAACTT      TTTAAGCTCTAGTGCTAAAGGTTACGTTTAAGTCGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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