SE0250085

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4602
  • Arabidopsis lyrata
  • SE0250085
  • PIF/harbinger
  • To23
  • scaffold_7:22012900-22013138
  • TTA
  • AGAGCAACCACAATGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                 -    C AAGAAGGTTTCTTAAGATTATAATATTAAAAAAAAATACAAAAAGAAGAGAGAGAACTAGAGATGTTTCTTATTTAAGGTACATTGTTAGTTAT
  AGAGCAACCACAATGGT GGTC T                                                                                              
  ||||||||||||||||| |||| |                                                                                              T
  TCTCGTTGGTGTTACCA CTTT G                                                                                              
AT                 A    - TTTAATAACTCAAAGAATATTTAATTTATAATTAAAAAACTATAATTTTTTTTACTTGGTGATTTTCTACCTGTTTACCTTCTTCTCAAATATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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