SE0230100

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4617
  • Arabidopsis lyrata
  • SE0230100
  • hAT
  • Hat32
  • scaffold_68:39494-39755
  • TGCCAGAC
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
   T   AGACCAGGGCCGGCGCAGAGGGCAAGCCACCGAAGCCACCGATTAGGGCCTCAAAATTTGAGGGCTTTTTTACCTAAAAATTTGTTAAGTTTTCTTATATACAATAATTTTTGTAGGGCCTTTTA
    GCC                                                                                                                             
    |||                                                                                                                             A
    CCG                                                                                                                             
CAGA   TGTCACGGCCGGGCCATTTAAACCCACGGGATTAGTTTTAATTTCAGGTATTTTTTTTAATAAAATTTAATCTAAAAATGATAATTTTTCATACAATATCAACAGAGATTTTCAGGTGTTATAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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