SE0250129

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4646
  • Arabidopsis lyrata
  • SE0250129
  • PIF/harbinger
  • To1
  • scaffold_7:6956874-6957092
  • TAA
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
         G ATGATTAACAAGGGTTGCTTAAAAATGGTTCTTAAAAGTATTAAAATAATAAATTTAAAAATGGTTTTTAAAAATGGATCTTAATGTTAAATTTGGATCTT
    TAAGA C                                                                                                     
    ||||| |                                                                                                      
    TGGTG G                                                                                                     
AATC     - TAATAGCCACCACAAAATTGATAAAGAATCGATTTAGAATCGATTTTTTAATTTCTTTTTAGAACAATTTATGATTCTAGGTTTTAATTTCACCGAATCGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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