SE2210004

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4727
  • Zea mays
  • SE2210004
  • Tc1/Mariner
  • St1
  • chr5:54737335-54737416
  • TA
  • TACTCCCTCCGTTTTTTTATTTGTCGCGGTTTAGTTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
    C    C      --T         - G   T      AA
TACT CCTC GTTTTT   TATTTGTCG C GTT AGTTCA  
|||| |||| ||||||   ||||||||| | ||| ||||||   
ATGA GGAG CAAGAG   ATAAACAGC G CGA TCAAGT  
    T    A      CTT         A G   -      AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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