SE2250094

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4817
  • Zea mays
  • SE2250094
  • PIF/harbinger
  • To4
  • chr4:59922958-59923080
  • TTA
  • AGGGCTAGTTTGGGAACCCCATTTCCCCAAGGGATTTTGATTTTCCTAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                 C C    CC            G      C         TTAG
  AGGGCTAGTTTGGGAAC C ATTT  CCAAGGGATTTT ATTTTC TAAGGGAAA    
  ||||||||||||||||| | ||||  |||||||||||| |||||| |||||||||    T
  TCCCGATCAAACCCTTG G TAAA  GGTTCCCTAAAG TAAAAG GTTCCCTTT    
AT                 A A    AA            A      A         TACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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