SE2250102

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4825
  • Zea mays
  • SE2250102
  • PIF/harbinger
  • To46
  • chr3:153193997-153194132
  • TCA
  • AGGGCTAGTTTGGGAGACACAAAACCAGAAGGGATTGGAGGGGCTAGAATCCCCTCCTTATTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TC                -A  C         A             C        C  C        AT
  AGGGCTAGTTTGGGAG  CA AAAACCAGA GGGATTGGAGGGG TAGAATCC CT CTTATTCA  
  ||||||||||||||||  || ||||||||| ||||||||||||| |||||||| || ||||||||   
  TCCCGATCAAACCCTC  GT TTTTGGTCT TCCTAATCTCCCC ATTTTAGG GA GAATAAGT  
AC                AG  -         C             A        A  A        TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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