SE2250107

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4830
  • Zea mays
  • SE2250107
  • PIF/harbinger
  • To4
  • chr3:14344726-14344848
  • TTA
  • AGGGCTAGTTTGGGAACCCAATTTTTCCAAGGGATTTCCATTTTTCCAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                   A      C           C                TTAG
  AGGGCTAGTTTGGGAACCC ATTTTT CAAGGGATTTC ATTTTTCCAAGGGAAA    
  ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||    T
  TCCCGATCAAACCCTTGGG TAAAAG GTTCCCTAAGG TAAAAAGGTTCCCTTT    
AT                   G      A           A                TACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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