SE2250127

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4850
  • Zea mays
  • SE2250127
  • PIF/harbinger
  • To24
  • chr5:66999202-66999525
  • ATA
  • GGGTCTGTTTGGTTGGGCT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATA    C         G          GTGGAAAAAGTTGCTGTGGGCTGTGAGCTGTGGAAAAAGCTGCTGTAGGCTGTGTGCTGTTTAAAAGCTAAAAATCGTTTGGTGGAAACCACTAAAAGTCGTTAAAAGTTCTTCGATATATGTTTTCACAGTAC
   GGGT TGTTTGGTT GGCTGTGGCT                                                                                                                                      
   |||| ||||||||| ||||||||||                                                                                                                                       
   CCCA ACAAACCAA CCGAAAACCG                                                                                                                                      
ATA    C         A          AAACCGAAAACGGGGGATTTTCGGTTTTCGGTTGGTTTCCCGACCTAGGTCCTTCGTCGAAAAAGATTTTCGGCTGAAAGAGCATCACGTTTTGACTTTCGTGGGGATCTGGACGAAAATCACCGAAAACCTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3