SE2210136

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4859
  • Zea mays
  • SE2210136
  • Tc1/Mariner
  • St11
  • chr6:158124607-158124764
  • TA
  • TACTCCCTCTATTCCAAATTCTAAGACATTTTGGCTTTTTTAGATATATTACCTTTACTATGTATCTAGAGTTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
                    C      A                     T  C   A        C    ---GTT   GA
TACTCCCTCTATTCCAAATT TAAGAC TTTTGGCTTTTTTAGATATAT AC TTT CTATGTAT TAGA      CTA  
|||||||||||||||||||| |||||| ||||||||||||||||||||| || ||| |||||||| ||||      |||   
ATGAGGGAGGTAAGGTTTAA ATTCTG AAAACCGAAAAGATCTATGTA TG AAA GATACGTG ATCT      GAT  
                    C      A                     T  A   -        A    ATATGT   AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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