SE2250144

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4867
  • Zea mays
  • SE2250144
  • PIF/harbinger
  • To4
  • chr6:158651269-158651391
  • TTA
  • AGGGCTAGTTTGGGAACTCTATTTTCCCAAGGGATTCCTATTTTCCCAAGAGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT             GA        T         A  CC            A    ATGA
  AGGGCTAGTTTGG  ACTCTATT TCCCAAGGG TT  TATTTTCCCAAG GAAA    
  |||||||||||||  |||||||| ||||||||| ||  |||||||||||| ||||    A
  TCCCGATCAAACC  TGGGGTAA AGGGTTCCC AA  GTAAAAGGGTTC CTTT    
AT             AT        T         A  AA            C    AATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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