SE2250172

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4895
  • Zea mays
  • SE2250172
  • PIF/harbinger
  • To30
  • chr6:123448947-123449090
  • TCA
  • AGGCCTAGTTTGGGTACTCTAGTAATGAGTGGGATTGGAGTGGATTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TC                  CTA   -AT     GGA      T      AGATGTATT     A    TT     AT
  AGGCCTAGTTTGGGTACT   GTA   GAGTG   TTGGAG GGATTG         GAGAG GTAT  GATCT  
  ||||||||||||||||||   |||   |||||   |||||| ||||||         ||||| ||||  |||||  T
  TCCGGATCAAACCTATGA   CAT   CTCAC   AACCTC CCTAAC         CTCTC CATA  TTAGG  
AC                  AAC   AAT     -AA      -      ---------     C    -T     GG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3