SE2250177

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4900
  • Zea mays
  • SE2250177
  • PIF/harbinger
  • To38
  • chr7:148593003-148593134
  • TAA
  • AGGCCTTGTTCGTTTGTGCCGGATTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               G  C       -GT     - GAACGATTCCTAACCGGATTGCTTCTCTA
  AGGCCTTGTTCGTTT TG CGGATTG   GGGTC G                             
  ||||||||||||||| || |||||||   ||||| |                              
  TCCGGAACAAGCAAA AT GCCTAAC   GGCCT A                             
AA               G  A       GTG     T GCAAGGTCGATTAGTTTCAAATATATTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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