SE2250186

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4909
  • Zea mays
  • SE2250186
  • PIF/harbinger
  • To4
  • chr5:211270413-211270535
  • TTA
  • AGGGCTAGTTTGGAAACCTCAATTTCCCAAGGGATTTCTATTTTCCCAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT             A           C  A                   A      TTAG
  AGGGCTAGTTTGG AACCTCAATTT CC AGGGATTTCTATTTTCCCA GGGAAA    
  ||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||    T
  TCCCGATCAAACC TTGGAGTTAAA GG TCCCTAAAGATAAAAGGGT CCCTTT    
AT             C           A  C                   A      TACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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