SE2250198

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4921
  • Zea mays
  • SE2250198
  • PIF/harbinger
  • To71
  • chr7:31776501-31776832
  • TTA
  • CCGTTTGGATGTAGATATTGGAGCGCAGAATTGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATACC            A          C -------CA        -AA      CCAGCTTTCCAAAATTCTGTTGTTTGGTTGCACGTGGAATTGAGATATGGAGTCAGAGGCTCAATTCCCTGGAATTGGACTGTAACTAGGAACACCCTCTCCCAATACAAAG
       CCGTTTGGATGT GATATTGGAG G         GAATTGGG   TTGGAA                                                                                                                
       |||||||||||| |||||||||| |         ||||||||   ||||||                                                                                                                 
       GGCAAACCTACA CTATAACCTC C         CTTAATCC   TTATGG                                                                                                                
ATTACGA            G          T CTACCTTAA        AAC      TTTAGTCCGTACCATAACTTTACTCTACATTAAGGTTAAGATAACAAACCTACAGTGACTTAACCTCAAACCTTAACACACCAGATTAAAGTGCGTTATGGCTCCCCACTCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3