SE2250201

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4924
  • Zea mays
  • SE2250201
  • PIF/harbinger
  • To47
  • chr5:120129459-120129583
  • TTA
  • AGGGTTGATTTGGTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                CAAG                               C      AAA
  AGGGTTGATTTGGTGA    GGGATCCCGGGAGGATTGGAGGGGATTGAGG GGAAAT   
  ||||||||||||||||    ||||||||||||||||||||||||||||||| ||||||    
  TCCCGACTAAACCACT    CCCTAGGGCCCTCCTAACCTCCCCTAACTCC CCTTTA   
AT                -TGG                               C      ATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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