SE2250218

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4941
  • Zea mays
  • SE2250218
  • PIF/harbinger
  • To4
  • chr6:136268170-136268292
  • TTA
  • AGGGCTAGTTTGGGAACTACATTTTCCCAAGGGATTTCTATTTTCCCAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                -  ACA      C                           ATGA
  AGGGCTAGTTTGGGAA CT   TTTTCC AAGGGATTTCTATTTTCCCAAGGGAAA    
  |||||||||||||||| ||   |||||| |||||||||||||||||||||||||||    A
  TCCCGATCAAACCCTT GG   AAAAGG TTCCCTAAAGATAAAAGGGTTCCCTTT    
AT                A  GCA      -                           AATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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