SE2230229

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4952
  • Zea mays
  • SE2230229
  • hAT
  • Hat40
  • chr7:28719356-28719528
  • TTAAAGAC
  • CAGGGGCGAAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAAGAC              GAAAATGGATCCACCGGGGTCGGCTCCATGAATTACTGGGGTCAAATACATTGATGAACAGTGT
        CAGGGGCGAAGCCA                                                                
        ||||||||||||||                                                                T
        GTCCCCGCTTCGAC                                                                
CAGAAATT              GGAATTCCGTGTCCCCAGCGGTCTGGGGCTACCTTAAACAGTTTAGGTCACATTTTATGACAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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