SE2230232

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4955
  • Zea mays
  • SE2230232
  • hAT
  • Hat19
  • chr7:91858677-91858869
  • TTCATAGG
  • GGCAGGGGCGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCATA           -AG  AG - TTTAAGATTGAGAGGGACAAATTAGATTGAGGGGGGCTGTTAAGAGGTATTTTACATTATTTATATGGTGA
      GGCAGGGGCGA   CC  C A                                                                       
      |||||||||||   ||  | |                                                                       T
      TTGTCCCCGCT   AT  C C                                                                       
GGATAC           AAG  -- C TCCCCGTGTCCCCCCGTTACAGGGGGGATTAGAAGATGTTTAAGGTATCTTCGATGATTAAAAAAATCAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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