SE2250235

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4958
  • Zea mays
  • SE2250235
  • PIF/harbinger
  • To58
  • chr6:70827455-70827579
  • TTA
  • AGGGCTACTTTGGGAACCTCAAATCCCCTTTGGGATTGGAGGGGATTGGGGTGGAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT       C         C            T   -                GTG     GAA
  AGGGCTA TTTGGGAAC TCAAATCCCCTT GGG ATTGGAGGGGATTGGG   GAAAT   
  ||||||| ||||||||| |||||||||||| ||| ||||||||||||||||   |||||    
  TCCCGAT AAACCTTTG AGTTTAGGGGAA TCC TAACTTCCCCTAACCT   CTTTA   
AT       C         -            -   A                GTG     ATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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