SE2250246

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4969
  • Zea mays
  • SE2250246
  • PIF/harbinger
  • To47
  • chr5:140301768-140301892
  • TTA
  • AGGGCTGATTTGGTGACCTGGGATCCCGGGAGGATTGGAGGGGATTGAGGGGGAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT    C            -CT           A                          TAG
  AGGG TGATTTGGTGAC   GGGATCCCGGG GGATTGGAGGGGATTGAGGGGGAAAT   
  |||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||||    
  TCCC ACTAAACCACTG   CCCTAGGGCCC CCTAACCTCCCCTAGCTCCCCCTTTA   
AT    A            TTC           A                          TTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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