SE2250248

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4971
  • Zea mays
  • SE2250248
  • PIF/harbinger
  • To4
  • chr6:166944439-166944561
  • TTA
  • AGGGCTAGTTTGGGAACACCATTTTCCCAATAGATTTCGATTTTCCTAAGGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                 A   -T   C    T      CG                ATAA
  AGGGCTAGTTTGGGAAC CCA  TTT CCAA AGATTT  ATTTTCCTAAGGGAAA    
  ||||||||||||||||| |||  ||| |||| ||||||  ||||||||||||||||    A
  TCCCGATCAAACCCTTG GGT  AAA GGTT TCTAAA  TAAAAGGGTTCCCTTT    
AT                 -   TT   A    C      AG                AATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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