SE2220265

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4988
  • Zea mays
  • SE2220265
  • Mutator
  • M10
  • chr5:3944504-3944677
  • AAAATTCTT
  • TTGGGAAATTTGGATCTGTACCATTAAAAGATTACAACTTTAGATATATACCATTGCT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAATTC      AAT                        A                      -         TTATATGTGGGATC
       TTGGGA   TTGGATCTGTACCATTAAAAGATT CAACTTTAGATATATACCATTG CTATCTCAC              
       ||||||   |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||              C
       AACCTT   AACCTGGATATGGTAATTTTCTGA GTTGAAATCTATATATGGTAAC GAGGTGTAC              
TTCTTAA      ATT                        C                      C         AGTAACTGAGTACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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