SE2250302

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5025
  • Zea mays
  • SE2250302
  • PIF/harbinger
  • To77
  • chr10:1932793-1932925
  • TAA
  • AGGCCATGTTCGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               GATC    AA                        ATGGA   GA   GATT
  AGGCCATGTTCGTTT    CCAA  CCATAGGGATTGAGGGGGATTGGA     TTG  GAG    
  |||||||||||||||    ||||  ||||||||||||||||||||||||     |||  |||     
  TCCGGTACAAGCAAA    GGTT  GGTATCCCTAACTCCCCCTAATTT     GAT  TTC    
AA               ACAC    -A                        -AGGG   -G   AGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3