SE2250304

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5027
  • Zea mays
  • SE2250304
  • PIF/harbinger
  • To38
  • chr10:63926540-63926671
  • TAA
  • AGGCCTTGTTCGTTTATGTCGGATTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               A          --CACC      C     -    --AATCAAAG    TAT
  AGGCCTTGTTCGTTT TGTCGGATTG      CGGAAT ATTCC AGCT          TTTA   
  ||||||||||||||| ||||||||||      |||||| ||||| ||||          ||||   A
  TCCGGAACAAGCAAA ACGGCCTAAC      GCCTTG TAAGG TTGG          AGAT   
AA               C          CACCCA      C     A    CCTAACGAAG    TAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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