SE2250354

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5077
  • Zea mays
  • SE2250354
  • PIF/harbinger
  • To90
  • chr10:147324631-147324871
  • TTA
  • AGGGCATGTACAACC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               ----------    ------ TAAAATAGGGTCTCTTGATATGTCACTAGGAAATTAATTAAAATTACAAAAGACAAAAAATAGACTCTTTAAGAAGAATTTGTATCTACG
  AGGGCATGTACAACC          CTAT      T                                                                                          
  |||||||||||||||          ||||      |                                                                                          C
  TCCCGTATATGTTGG          CCTT      A                                                                                          
AT               ATCTCTAAAA    ACCAAA GTTTATGTTCTCTGTCAATTCTCTGATCTATCATGTTGAAACTCTGAAACTTAGTATTTATGTTAATTCTCTATTACACATACCTCTTAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3