SE2250379

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5102
  • Zea mays
  • SE2250379
  • PIF/harbinger
  • To46
  • chr8:157297367-157297503
  • TTA
  • AGGGCTAGTTTGCGAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            C    CACAAA     T  GA    AA      C     G  -     C     AT
  AGGGCTAGTTTG GAGC      ACCGG GG  ATTG  GGGAGC AAAAT CC CTTCT ATTCA  
  |||||||||||| ||||      ||||| ||  ||||  |||||| ||||| || ||||| |||||   
  TCCCGATCAAAC CTTG      TGGTC CC  TAAC  TCCTCG TTTTA GG GAAGA TAAGT  
AT            C    ATTTTA     T  AC    -C      A     -  A     A     TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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