SE2250382

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5105
  • Zea mays
  • SE2250382
  • PIF/harbinger
  • To58
  • chr8:154312477-154312601
  • TAA
  • AGGGCTAGTTTGGAAACTCAAATCCCCTTCGGGATTGAAGGGGGTTGGAGAGAAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA       G     - AA   A                 A          A A A    TAG
  AGGGCTA TTTGG A  CTC AATCCCCTTCGGGATTG AGGGGGTTGG G G AAAT   
  ||||||| ||||| |  ||| ||||||||||||||||| |||||||||| | | ||||    
  TCCCGAT AAACC T  GAG TTAGGGGAAGCCTTAAC TCCCCTAACT C C TTTA   
AA       G     C TG   C                 C          C A C    TTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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