SE2250400

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5123
  • Zea mays
  • SE2250400
  • PIF/harbinger
  • To58
  • chr8:154312477-154312601
  • TTA
  • AGGGCTACTTTGGGAACCTCGAATCCCCTTCGGAATTGGAGGGGATTGAGGTGGAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT       C         C               A          A   A  T      AAA
  AGGGCTA TTTGGGAAC TCGAATCCCCTTCGG ATTGGAGGGG TTG GG GGAAAT   
  ||||||| ||||||||| ||||||||||||||| |||||||||| ||| || ||||||    
  TCCCGAT AAACCTTTG AGTTTAGGGGAAGCC TAACTTCCCC AAC TC CTTTTA   
AT       C         -               C          C   C  T      ATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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