SE2250438

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5161
  • Zea mays
  • SE2250438
  • PIF/harbinger
  • To4
  • chr8:79696517-79696639
  • TAA
  • AGGGCTAGTTTGGGAACCCCATTTCCCCAAGGGATTTCCATTTTCCCAAGGAAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                        C                          -     TAG
  AGGGCTAGTTTGGGAACCCCATTT CCCAAGGGATTTCCATTTTCCCAAGG AAAAT   
  |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
  TCCCGATCAAACCCTTGGGGTAAA GGGTTCCCTAAAGGTAAAAGGGTTCC TTTTA   
AA                        A                          C     CTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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