SE2210452

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5175
  • Zea mays
  • SE2210452
  • Tc1/Mariner
  • St9
  • chr9:132724219-132724394
  • TA
  • TACTCCCTCCGTCCCAGGATATAAGGCGTAACTACTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                                      TTATT    TCACACAATATAAGGCGTGCTCTCTCTATGCATACGTATATCG
TACTCCCTCCGTCCCAGGATATAAGGCGTAACTACTTT     CTTG                                           
||||||||||||||||||||||||||||||||||||||     ||||                                           A
ATGAGGGAGGCAGGGTCCTATATTCCGCATTGGTGGAG     ACCA                                           
                                      -----    AGTTTCTGGTTCTTTACGTAAATTAACAGAGATATGGTGACGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3