SE2250464

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5187
  • Zea mays
  • SE2250464
  • PIF/harbinger
  • To36
  • chr9:134301162-134301306
  • TTA
  • GTTTGGATACTCTAGTATTGACCCCAATCCACATGTGTTGAGGTGGATTGGGGTGTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAGACCTA      A                                                   CTCAA
         GTTTGG TACTCTAGTATTGACCCCAATCCACATGTGTTGAGGTGGATTGGGGTGTAA     
         |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     A
         CAAACC ATGAGATCATAACTGGGGTTAGGTGTACACAACTCCACCTAACCCCACATT     
ATTCCGAAA      C                                                   AAATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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